Urinary Pathogen ID/AMR Enrichment Kit
The Urinary Pathogen ID/AMR Panel (UPIP) is a next-generation sequencing (NGS) research panel that enables detection and quantification of over 170 uropathogens responsible for urinary tract infections (UTIs) and co-infections and covers more than 3700 markers and their alleles associated with antimicrobial resistance (AMR).
- Delivers simultaneous detection of 120+ bacteria, 35 viruses, 14 fungi, 4 parasites, and 27 sexually transmitted pathogen plus associated AMR alleles
- Enriches uropathogen target regions from a range of host and environmental samples
- Detects less common, challenging-to-grow, and frequently missed uropathogens
- Outperforms shotgun metagenomics and conventional urine culture methods
Properties
Value
Properties
:Assay time
Value
:< 9 hr library prep and enrichment time
Properties
:Automation capability
Value
:Liquid handling robot(s)
Properties
:Hands-on time
Value
:< 2 hr library prep and enrichment time
Properties
:Input quantity
Value
:Based on volume (not concentration dependent)
Properties
:Instruments
Value
:MiSeq System, NextSeq 550 System, NextSeq 2000 System, NextSeq 1000 System, MiSeqDx in Research Mode, MiniSeq System, NextSeq 550Dx in Research Mode, MiSeq i100 System, MiSeq i100 Plus System
Properties
:Mechanism of action
Value
:On-bead tagmentation followed by a single hybridization step
Properties
:Method
Value
:Targeted DNA sequencing, Target enrichment
Properties
:Multiplexing
Value
:Up to 384 samples in a single run with unique dual indexes
Properties
:Nucleic acid type
Value
:DNA
Properties
:Sample type details
Value
:DNA extracted from human urinary clinical research samples and other surveillance related samples such as wastewater
Properties
:Specialized sample types
Value
:Not FFPE-compatible
Properties
:Species category
Value
:Other, Human, Virus, Bacteria
Properties
:Technology
Value
:Sequencing
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